Concept Graph & Resume using Claude 3.5 Sonnet | Chat GPT4o | Llama 3:
Resume:
1.- Energy-based models: Parameterize probability distributions using an energy function, offering flexibility in model design.
2.- Log likelihood gradient: Can be estimated using samples from the model, enabling training of energy-based models.
3.- Continuous vs. discrete data: Gradient-based sampling methods work well for continuous data, but are challenging for discrete data.
4.- Importance of discrete data: Many data types like text, tabular data, proteins, and molecular graphs are discrete.
5.- Gibbs sampling: A simple method for sampling discrete distributions by iteratively updating individual dimensions.
6.- Inefficiency of Gibbs sampling: Many proposed updates are rejected, wasting computation.
7.- Dimension-wise proposal distribution: A more efficient sampling approach that proposes updates based on the entire input.
8.- Metropolis-Hastings acceptance probability: Used to accept or reject proposed updates in MCMC sampling.
9.- Optimal proposal distribution: Balances high likelihood of proposed samples with high entropy of the proposal distribution.
10.- Temperature parameter: Controls the trade-off between likelihood and entropy in the proposal distribution.
11.- Near-optimal proposal: Achieved when the temperature is set to 2, simplifying the acceptance probability.
12.- Computational challenge: Naive implementation of the optimal proposal requires evaluating all possible dimension flips.
13.- Continuous differentiable functions: Many discrete distributions can be expressed as continuous functions restricted to discrete inputs.
14.- Taylor series approximation: Used to efficiently estimate likelihood differences for all dimensions.
15.- Gibbs with gradients: A new MCMC sampler that approximates the optimal proposal using gradient information.
16.- Efficiency: Gibbs with gradients requires only O(1) function evaluations per update, unlike naive Gibbs sampling.
17.- RBM sampling experiment: Gibbs with gradients produces realistic samples more efficiently than Gibbs sampling.
18.- Image denoising with Ising models: Gibbs with gradients converges faster to reasonable solutions than Gibbs sampling.
19.- Protein contact prediction: An important task in computational biology using POTS models.
20.- POTS model training: Gibbs with gradients outperforms pseudo-likelihood maximization and Gibbs sampling, especially for large proteins.
21.- Deep energy-based models: Recent success in using deep neural networks to parameterize energy functions.
22.- Discrete deep energy-based models: Applying deep energy-based models to discrete data, which was previously challenging.
23.- Persistent contrastive divergence: A training method for energy-based models, adapted for discrete data using Gibbs with gradients.
24.- Performance comparison: Deep energy-based models trained with Gibbs with gradients outperform VAEs and classical energy-based models.
25.- Annealed MCMC: Used to generate high-quality samples from trained energy-based models.
26.- Scalability: Gibbs with gradients enables application of energy-based models to high-dimensional discrete data.
27.- Versatility: The method can be applied to various types of discrete distributions and energy-based models.
28.- Implementation simplicity: Gibbs with gradients is easy to implement in standard machine learning frameworks.
29.- Broader impact: Enables energy-based models to be applied to a wider range of data types and problems.
30.- Future work: Potential applications in text modeling, structure inference, and other discrete data domains.
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